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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115459218, gi...
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASGSATL LYPKTPQSPR LLRRNPHYSG LRLVHPLLLA TVSPPPPAAL RRRRNSTTIH  60
   61 ASSSSAAAGA AAASFPASST PPPRPPRTDP PEEHPTVARA GRSKKHRKPS GGRIEGGGDV 120
  121 RREAKSRARI RSRRLGENAF YRRKRRAAKE NQADAFTDAE LEMIGLGYDR SVRFMDGPDD 180
  181 PRLRHRHDWY RFGRYGPYSW RGIVVGPPIR GRFSDDRVSL MSEVSDHDEW DRVEQFDMSN 240
  241 QFSNRLNELD AAVGFRYYWV FVRHPRWRPD ELPWEQWTLS AEVAIQASEE QRLDKWNLMG 300
  301 RLGNPTRELI TRCAAWTRPD IIYVKRPLYQ SRFEPQKNFY SQLRPLVDPV TENQFLFDLE 360
  361 HDGQVIRTTY FGGLCRIVKA SPKAYVDDVV NAYSKLSDVD KNRCLEFLLT NHPMELLHPY 420
  421 TKEWKVKLEE MELGCDAPDD NESDDEGGDE SGTEVVDWVE DDGFDEGGDT DDDEEPGYDD 480
  481 DEVIDVREEV ETEEVESDDE SEKYWDEQWK QAMKSSDKME KLVKTSIEAS NEYNRRRMQQ 540
  541 EKEMELRMAR ANTMVMKQEQ TEDEDEQQEQ IEDEDEQQES PRGRSAKDKR KSKAPGHFLR 600
  601 AAVRPFTYRN LVKEIVLMRH FIVDGEID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle