YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116309905, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPETGPYGHK KTDGICDGVC GEPASKAVLT MSRLRCALRG FDFRALLALL IGVPILILMI  60
   61 YAHGQKVTYF LRPIWESPPK PFKTIPHYYH ENVTMAKLCK LHGWKVRETP RRVFDAVLFS 120
  121 NELDILEIRW NELSPYVSEF VLLESNSTFT GLKKPLHFKE NRHRFGFAES RLTYGMIGGR 180
  181 FVKGENPFVE ESYQRVALDQ LIKIAKIEDD DLLIMSDVDE IPSGHTIDLL RWCDDIPEIL 240
  241 HLQLRNYLYS FEFFLDDKSW RASIHRYRSG KTRYAHFRQT DELLADSGWH CSFCFRYISD 300
  301 FAFKMQAYSH VDRIRFKYFL NPERIQDVIC RGADLFDMLP EEYTFQEIIA KLGPIPSTFS 360
  361 AVHLPSYLLQ NVDRYRYLLP GYCRRESG

Type	Start	End	Confidence
Cytoplasmic	1	40	0.98
Transmembrane Helix	41	64	0.90
Non-Cytoplasmic	65	388	0.99