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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50920715, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISPPPPSP SSGDPIEAAR HAAAAALAVP ARLWGSLLAR LPSLSDRRPR RRRRPALPLP  60
   61 FRTAAAHSAR ATGETPKAFG ILEDIVQHTL CSLHGIQKSL LFWQSKAEGT NSQKMYFMIF 120
  121 ERGPRAFVKA TYQTLTRLRS NESPTQYILH SASDMVSTKL AVLTNMQHCL AAFLAEVYCE 180
  181 VDKFKEGLTE NSDKSLHTLF AVLNTVFSKL EVSLQNVCEG HTLLFALDGS PSELLFERLP 240
  241 EIDYDNSEWT EASSTDAICF IYQNLQKLDN LVCSQLSRHK KPRHMTIYWL PYTCGALGLS 300
  301 ACSLWLLRHS SLMGSSDIDN WVQSAKESIA GFWDVHVEKP VGYFLFMSFY YLSYAFLNDA 360
  361 SIISIRGELF ETFKNRGFCP RPQDTKMMLE FCQQTSNEKL PQDISDQALM ENFMERYEKE 420
  421 WTHPVKNLFG GELAYAMLIQ LQKRTVDIKQ AMLELDQILK GNAINFAILA ALPAFGVSLL 480
  481 LLTVVQAWIM NDQGAEGRGR IARRQRRLLL LDAERKLMEF KNCMINGMEE EACCKFGLTL 540
  541 YNLDRLYRAV ESHAEETGEW SRLREDILDL AKPKMSMTDK LVVLSRLKGT YDCFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle