YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33600967, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFGSFDNKG SGSHTVSEIN MVPLIDVMLV LLVIFIITAP LLAHSIRINI PQVSAEQIEE  60
   61 EPKTIDLAID ANGALFWDEK PVSIDDLPNR FKAIAGDKPQ AEIRIRADQA TRYETLAQVM 120
  121 ASARRSGMTR IGFITSPAPQ GAPGEAGASA APAAP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.55
Transmembrane Helix	21	44	0.88
Non-Cytoplasmic	45	155	0.57