YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33565846
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERTEHAAD LPPPHGAGHH HEDDDGPHGT LASYLTGFVL AAILTAIPFW LVMDGVFASS  60
   61 RTTALVILAF AVVQIVVHLV YFLHMDAKSE SGWNMLALIF TLVLVVITLS GSIWIMYHLN 120
  121 SNMMPMSVHD VRNMP

Type	Start	End	Confidence
Cytoplasmic	1	29	0.52
Transmembrane Helix	30	53	0.87
Non-Cytoplasmic	54	61	0.44
Transmembrane Helix	62	84	0.90
Cytoplasmic	85	94	0.46
Transmembrane Helix	95	118	0.91
Non-Cytoplasmic	119	135	0.52