YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33592490, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAFTMEQLN GWLAQFLWPF VRILALVGAA PLFSESTIPT RVKIGLAFML TIAVAPAIGP  60
   61 MPAVPPSSYA GLFLLSQQVL IGIALGLSMR VVFAAVQTAG EFVGLQMGLS FASFFDPATG 120
  121 ANTAVLSRLF NIVAMLVFLA LDGHLLVLGA LVRSFDTLPV AVGVLDRNGW GILAEWGTTI 180
  181 FVSGLLLALP LICALLTINL AMGILNRAAP QLSVFAIGFP VSLIVGLVLL AIVLPHSGPF 240
  241 LERLFEQGLN TMNNVANGLA GK

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.74
Transmembrane Helix	12	34	0.85
Cytoplasmic	35	43	0.63
Transmembrane Helix	44	64	0.90
Non-Cytoplasmic	65	72	0.60
Transmembrane Helix	73	105	0.64
Cytoplasmic	106	128	0.55
Transmembrane Helix	129	152	0.81
Non-Cytoplasmic	153	178	0.76
Transmembrane Helix	179	201	0.90
Cytoplasmic	202	211	0.73
Transmembrane Helix	212	234	0.92
Non-Cytoplasmic	235	262	0.82