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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33592217, gi|...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNSFSKVAV WMVIALVLFT VFKQFDGRAQ TQDGVSYTQF MDDAKAGRIR KVDVQGDVLY  60
   61 VTPDAGRPYS LTSPGDLWMV SDLLKYGVQV SGKAREEPSL LMSIFVSWFP MLLLIGVWIF 120
  121 FMRQMQGGGR GGAFSFGKSR ARMLDENTNQ VTFADVAGCD EAKEDVQELV DFLRDPSKFQ 180
  181 KLGGRIPRGV LMVGSPGTGK TLLAKAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 240
  241 NAKKHAPCII FIDEIDAVGR QRGAGLGGGN DEREQTLNQM LVEMDGFESG QGVIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VPLPDIRGRE QILKVHMRKV PLSPNVDATI LARGTPGFSG 360
  361 ADLANLVNEA ALFAARRNGR TVDMSDFEKA KDKIIMGAER RSIVMPEEER KNTAYHESGH 420
  421 AIVARMLPKT DPVHKVTIIP RGRALGVTMQ LPETDRYSMD KERLLNTIAV LFGGRIAEEI 480
  481 FMNQMTTGAS NDFERATAIA RDIVTRYGMT DELGPMVYAE NEGEVFLGRS VTKTTHVSEA 540
  541 TMQKVDSEIR RIIDEQYGVA RKILEDNRAR VEVMTSALLE WETIDADQID DIVNDRPPRP 600
  601 PKTPQGPSDT FDTPPTGLAA GGNTAAAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle