YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7436002
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRSAGRNS PILPLMSHSD LPLANAVPLD KIRYNDQGLV PAIAQDYLDG TVLMLAWMNE  60
   61 AALAKTLATG QVWYWSRSRQ ELWHKGATSG HFQKLLGIRY DCDSDALLLT IEQKGDIACH 120
  121 TGERSCFHQL DGHKSPPPAD MLTELARVIG DRRDHPTPES YTCKLLAGGD NKILKKIGEE 180
  181 SAEVVMACKD DDPEAIAGEV ADLFYHTLVA LAHHNVDLRA VYRKLGDRRR

Type	Start	End	Confidence
Signal Peptide	1	26	0.52
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	230	0.98