YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7469947
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTKRSPTGI RQFVLFNHFS VNFLRNLLIM KNIIIAGLLS GLACTVSTMP AMAQNQNLDL  60
   61 HWQSGDTSEQ MLAQWGWGNK KGGQGQWMES LDLTDSQKQQ LEAIRQKYQG QMQSLSEQMR 120
  121 TSQNELRTLM SGNGSDSEIR AKHNQVANLR QQLGELRFNS MLESRQVLTP EQRQKFSQLM 180
  181 QERRNSRQGR RGMGNQQ

Type	Start	End	Confidence
Signal Peptide	1	53	0.86
N-region	1	44
H-region	45	50
C-region	51	53
Cleavage Site	53	54
Non-Cytoplasmic	54	197	0.99