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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7470838
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKFLDLLQK YWLLPCLLLA GYGGNYFKLH IFFGVDFLFG SIATLLVLVC YSLPWGLVSA  60
   61 AIAGSHTLII WRHGYGILII ILEALVVGLM LRRRQTNLVL INSLFWLLIG IPLVYIFYRW 120
  121 GLNMTSVTTS LITLKQATNG IFNSLIASFL ITGFGLSKQK FSPSTNPAFF PWKKLSFEQT 180
  181 LFNLLVAFVF FPLFFITVVN GQEAFVQMEK QTVQELTALS IPIQNSVEDW YQSHLEGAEV 240
  241 FATEILPLVA AINQGNGAQL PALSLMTHTI QTAFTGFSNI YVGDRQGQII ASSPEFNEVG 300
  301 ESRLGLIQAE KIAGFSIPSQ IQVSPLHRTN VNVDPHVAIT IPLVANNSFE GFINASLNLA 360
  361 KMKDLLYANR VSKELNITLI NGQNQVVAST IANVLPLEIY QPFEGGDPRD LGSSNYHWYP 420
  421 DTPANPTIRW RDSYYYHILP LDKINDWQLV LGLPARESIE KLQAQSVQKL GLLLFLSLVG 480
  481 LVVAIGVSKR VANPLLTLAK ITTDIPTKMQ YQGLTPIALR SEVSEVITLN ENFNEMLITL 540
  541 QNQFKIIKQA KDNLEMRVAE RTHTLIVINK QLAGEIEERQ RIEIKLREAK ESAELANRVK 600
  601 SEFLANISHE IRTPMNAILG FCDLLLQKDL SLSQTKKYLN AIGSSSKILL ALIDDILDIS 660
  661 KIEAGKLVIH LEPVDLRVII REIKQIFDYK AESKSLLLTI QIDETLNQAI YFDAVRLRQI 720
  721 LFNLVGNALK FTEEGQVFIY IGVEGIQVRS QGTYISLAIE VTDTGIGIAP EDQAKIFDVF 780
  781 TQSQGQSTRK YGGTGLGLTI TRRLTALLGG EISLSSRLGE GSTFILHFPA VRLVENSLKS 840
  841 DLTNGDGGNL TDRLGSMSSS SANTTEKLLP TRVGNMAPDN NSLGNHNGPS QGFPRAVPLI 900
  901 DQAQRQQLIS LLEQEETNVW NKLRHTLISR QIRNFGDRLS SWGNEYGWED LHTYGQSIIK 960
  961 ALENFDSRRL EQLMGQFPQY RASLTEVSAG VDGKHASE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle