YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16329650, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGRTHGIIR PTLLRPIFLM KFFTAMRDIL ISLTVVTFFS LVLISVAIFG KSSPSAIAAP  60
   61 QEVKPVQIAQ ASALQTPEPS PMTAENSANI VTTESGLQYI DEVVGEGPSP TKGQKVEVHY 120
  121 TGRLTDGTKF DSSVDRNKPF TFTIGVGQVI KGWDEGVATM QVGGKRKLII PPDLAYGSRG 180
  181 AGGVIPPNAT LEFEVELLGI K

Type	Start	End	Confidence
Cytoplasmic	1	28	0.54
Transmembrane Helix	29	50	0.64
Non-Cytoplasmic	51	201	0.87