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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16329385, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPSSLSALR FFLGFVNFNF SALINAHYTV SSYRPQPRST RRRMTKKSPK ANGGFFPALM  60
   61 LVGLIGAGIW YFSPSGGSKN LPPVNLGAIA DNLPQGINPK TLVVTQRVDN PIAGNTKSFS 120
  121 VDGGERLDNL ARTINYQGTS VKELADLIRP LASNDWEEAR LAYSWITQNI AYDVPMAETR 180
  181 NIDDLRPETV LARGETICSG YSNLYQALAK ELGLDVVIIE GFAKGGDVIV GDDPDVNHAW 240
  241 NGVKIDGQWY LLDTTWGAGI VSDGKFEAKF NPTYFATAPE QLIVSHFPRE SQWQLLPQPY 300
  301 DRQTFDQLPA LTPRFFRDQI ALVSHPKNDI VAGGDLEVIL RTGNDVQVVA QLMDNNGQPL 360
  361 DKQYTLSQSQ QSQVTVNAAF PQPGEYQLLI LSKNSQEDTY YQAIAYDVKA QGAGQAFPST 420
  421 YGTFSEKQVR LISPLGRNLP QNQASYFQLQ VPGAEKVVLV DEQRQELIPL DRTGDVFTGS 480
  481 EIIRFDNVTV AAQFPGSNQF WSLLEYE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle