YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38505619, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSGAILYV PLFLSMLFLL AIYGITFCFI FCINYSFDVY NCQILFSNSM DKNIWLILSL  60
   61 CTTMITACSQ KQMQEMASNT MVTQNRTPDK TWRVKPGSVH DGDTFRAVAD VTNEEIKVRL 120
  121 ACIDAPELEQ AGGVEARDYL RSMLTDNREI ILMGAGKDQY GRSVVEVFAI TDTPGLEVGV 180
  181 NGEMVLAGMA HYYERYKRSC PENAEQYEFL EQEAISSKAG VWANGDAERP WNWRGRNK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.64
Transmembrane Helix	9	33	0.82
Non-Cytoplasmic	34	53	0.68
Transmembrane Helix	54	70	0.63
Cytoplasmic	71	238	0.58