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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH_CAUCN
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFRNLAIWL VIVAVLGGVF VVSQNSRTKS SSEISYSQLL KDVDAGKIKS AEIAGQTVLA  60
   61 KTADNKTLTV NAPMNSEELV NRMVAKNADV KFKSGSISFL AILVQLLPIL LVVGVWLFLM 120
  121 RQMQGGAKGA MGFGKSKARL LTENKNRITF EDVAGVDEAK EELQEVVDFL KDPAKFQRLG 180
  181 GKIPKGALLV GPPGTGKTLI ARAVAGEAGV PFFTISGSDF VEMFVGVGAS RVRDMFEQAK 240
  241 KNAPCIIFID EIDAVGRHRG AGLGGGNDER EQTLNQLLVE MDGFEANEGI ILIAATNRPD 300
  301 VLDPALLRPG RFDRQVVVPN PDVAGREKII RVHMKNVPLA ADVDVKTLAR GTPGFSGADL 360
  361 ANLVNEAALM AARKNRRMVT MQDFEQAKDK VMMGAERRSM AMNEEEKKLT AYHEGGHAIV 420
  421 ALNVPLADPV HKATIVPRGR ALGMVMQLPE GDRYSMKYQQ MTSRLAIMMG GRVAEEIIFG 480
  481 KENITSGASS DIKAATDLAR NMVTRWGYSD ILGTVAYGDN QDEVFLGHSV ARTQNVSEET 540
  541 ARLIDSEVKR LVQYGLDEAR RILTDKIDDL HTLGKALLEY ETLSGEEIAD ILKGIPPKRE 600
  601 EEEAATAVIA PSLVPLSPGA GASVTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle