YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13423945, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWTRDEMAA RAARELKNGF YVNLGIGIPT LVANHIPEGV HVTLQSENGM LGMGPFPYED  60
   61 EADPDLINAG KQTITKLPTS SFFDSAQSFA MIRGGHIDLT VLGAMEVAQN GDIANWTIPG 120
  121 KMVKGMGGAM DLVAGVKRVI VVMDHANKAG QSKVLKRCAL PLTGAACVDM VITDLCVFDL 180
  181 DRKGGGLTLI ELAPEVTLDE VKAKTAADFD AGAFA

Type	Start	End	Confidence
Cytoplasmic	1	18	0.54
Transmembrane Helix	19	36	0.53
Non-Cytoplasmic	37	215	0.97