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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IGA1A_STRPN
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKYFGEKQE RFSFRKLSVG LVSATISSLF FMSVLASSSV DAQETAGVHY KYVADSELSS  60
   61 EEKKQLVYDI PTYVENDDET YYLVYKLNSQ NQLAELPNTG SKNERQALVA GASLAAMGIL 120
  121 IFAVSKKKVK NKTVLHLVLV AGIGNGVLVS VHALENHLLL NYNTDYELTS GEKLPLPKEI 180
  181 SGYTYIGYIK EGKTTSESEV SNQKSSVATP TKQQKVDYNV TPNFVDHPST VQAIQEQTPV 240
  241 SSTKPTEVQV VEKPFSTELI NPRKEEKQSS DSQEQLAEHK NLETKKEEKI SPKEKTGVNT 300
  301 LNPQDEVLSG QLNKPELLYR EETMETKIDF QEEIQENPDL AEGTVRVKQE GKLGKKVEIV 360
  361 RIFSVNKEEV SREIVSTSTT APSPRIVEKG TKKTQVIKEQ PETGVEHKDV QSGAIVEPAI 420
  421 QPELPEAVVS DKGEPEVQPT LPEAVVTDKG ETEVQPESPD TVVSDKGEPE QVAPLPEYKG 480
  481 NIEQVKPETP VEKTKEQGPE KTEEVPVKPT EETPVNPNEG TTEGTSIQEA ENPVQPAEES 540
  541 TTNSEKVSPD TSSKNTGEVS SNPSDSTTSV GESNKPEHND SKNENSEKTV EEVPVNPNEG 600
  601 TVEGTSNQET EKPVQPAEET QTNSGKIANE NTGEVSNKPS DSKPPVEESN QPEKNGTATK 660
  661 PENSGNTTSE NGQTEPEPSN GNSTEDVSTE SNTSNSNGNE EIKQENELDP DKKVEEPEKT 720
  721 LELRNVSDLE LYSLSNGTYK QHISLEQVPS NPNSYFVKVK SSSFKDVYLP VASISEERKN 780
  781 DKILYKITAK VEKLQQEIES RYKDNFTFYL AKKGTEETTN FTSFSNLVKA INQNPSGTYH 840
  841 LAASLNANEV ELGPDERSYI KDTFTGRLIG EKDGKNYAIY NLKKPLFENL SGATVEKLSL 900
  901 KNVAISGKDD IGSLANEAQN NTKIKQVHVD GVLAGERGIG GLLAKAEQSS ITESSFKGRI 960
  961 INTYETTAAY NIGGMVGHLT GDKALLTKSK ATVAISSNTN TSDQTVGGLA GLVDRDAQIQ1020
 1021 DSYAEGDINN VKHFGRVAGV AGNLWDRTSG DVRHAGSLTN VLSDVNVTNG NAITGYHYNE1080
 1081 MKVKDTFSSK ANRVYNVTLV KDEVVSKESF EERGTMLDAS QIASKKAEIN PLILPTVEPL1140
 1141 STSGKKDSDF SKVAYYQAKR NLTYKNIEKL LPFYNKATIV KYGNLVNENS LLYQKELLSA1200
 1201 VMMKDNQVIT DIVSNKQTAN KLLLHYKDDL SEKLDLKYQN DFAKLAEYSL GNTGLLYTPN1260
 1261 QFLYDQTSII KQVLPDLQKV DYHSEAIRKT LGISPNVKQT ELYLEDQFAK TKQQLEDSLK1320
 1321 KLLSADAGLA SANPVTEGYL VDKIKRNKEA LLLGLTYLER WYNFSYGQVN VKDLVLYHLD1380
 1381 FFGKGNASPL DTLIELGKSG FNNLLAKNNV DTYGISLASQ HGTTDLFSTL EHYRKVFLPN1440
 1441 TSNNDWFKSE TKAYIVEEKS TIEEVKTKQG LAGTKYSIGV YDRITSATWK YRNMVLPLLT1500
 1501 LPERSVFVIS TMSSLGFGAY DRYRSSDHKA GKALNDFVEE NARETAKRQR DHYDYWYRIL1560
 1561 DDNAREKLYR NILLYDAYKF GDDNTVGKAT EVADFDNPNP AMQHFFGPVG NKVGHNQHGA1620
 1621 YATGDAVYYM GYRMLDKDGA ITYTHEMTHD SDQDIYLGGY GRRSGLGPEF FAKGLLQAPD1680
 1681 HPDDATITIN SILKHSKSDS TESRRLQVLD PTTRFNNADD LKQYVHNMFD VVYMLEYLEG1740
 1741 NSILKLDTNQ KQQLLRKVTN EYHPDPDGNK VYATNVVRNL TVEEVERLRS FNDLIDNNIL1800
 1801 SSREYASGKY ERNGYFTIKL FAPIYAALSN DIGTPGDLMG RRIAYELLAA KGFKDGMVPY1860
 1861 ISNQYEEEAK QKGKTINLYG KTRGLVTDDL VLEKVFNNQY HTWSEFKKAM YQERQDQFDR1920
 1921 LNKVTFNDTT QPWQTFAKKT TSSVDELQKL MDVAVRKDAE HNYYHWNNYN PDIDSEVHKL1980
 1981 KRAIFKAYLD QTNDFRSSIF ENKK

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