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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15900565, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSVVDAAT YHYVNKEIIS QEAKDLIQTG KPDRNEVVYG LVYQKDQLPQ TGTEASVLTA  60
   61 FGLLTVGSLL LIYKRKKIAS VFLVGAMGLV VLPSAGAVDP VATLALASRE GVVEMEGYRY 120
  121 VGYLSGDILK TLGLDTVLEE TSAKPGEVTV VEVETPQSIT NQEQARTENQ VVETEEAPKE 180
  181 EAPKTEESPK EEPKSEVKPT DDTLPKVEEG KEDSAEPAPV EEVGGEVESK PEEKVAVKPE 240
  241 SQPSDKPAEE SKVEQAGEPV APREDEKAPV EPEKQPEAPE EEKAVEETPK QEESTPDTKA 300
  301 EETVEPKEET VNQSIEQPKV ETPAVEKQTE PTEEPKVEQA GEPVAPREDE QAPTAPVEPE 360
  361 KQPEVPEEEK AVEETPKPED KIKGIGTKEP VDKSELNNQI DKASSVSPTD YSTASYNALG 420
  421 PVLETAKGVY ASEPVKQPEV NSETNKLKTA IDALNVDKTE LNNTIADAKT KVKEHYSDRS 480
  481 WQNLQTEVTK AEKVAANTDA KQSEVNEAVE KLTATIEKLV ELSEKPILTL TSTDKKILER 540
  541 EAVAKYTLEN QNKTKIKSIT AELKKGEEVI NTVVLTDDKV TTETISAAFK NLEYYKEYTL 600
  601 STTMIYDRGN GEETETLENQ NIQLDLKKVE LKNIKRTDLI KYENGKETNE SLITTIPDDK 660
  661 SNYYLKITSN NQKTTLLAVK NIEETTVNGT PVYKVTAIAD NLVSRTADNK FEEEYVHYIE 720
  721 KPKVHEDNVY YNFKELVEAI QNDPSKEYRL GQSMSARNVV PNGKSYITKE FTGKLLSSEG 780
  781 KQFAITELEH PLFNVITNAT INNVNFENVE IERSGQDNIA SLANTMKGSS VITNVKITGT 840
  841 LSGRNNVAGF VNNMNDGTRI ENVAFFGKLH STSGNGSHTG GIAGTNYRGI VRKAYVDATI 900
  901 TGNKTRASLL VPKVDYGLTL DHLIGTKALL TESVVKGKID VSNPVEVGAI ASKTWPVGTV 960
  961 SNSVSYAKII RGEELFGSND VDDSDYASAH IKDLYAVEGY SSGNRSFRKS KTFTKLTKEQ1020
 1021 ADAKVTTFNI TADKLESDLS PLAKLNEEKA YSSIQDYNAE YNQAYKNLEK LIPFYNKDYI1080
 1081 VYQGNKLNKE HHLNTKEVLS VTAMNNNEFI TNLDEANKII VHYADGTKDY FNLSSSSEGL1140
 1141 SNVKEYTITD LGIKYTPNIV QKDNTTLVND IKSILESVEL QSQTMYQHLN RLGDYRVNAI1200
 1201 KDLYLEESFT DVKENLTNLI TKLVQNEEHQ LNDSPAARQM IRDKVEKNKA ALLLGLTYLN1260
 1261 RYYGVKFGDV NIKELMLFKP DFYGEKVSVL DRLIEIGSKE NNIKGSRTFD AFGQVLAKYT1320
 1321 KSGNLDAFLN YNRQLFTNID NMNDWFIDAT EDHVYIAERA SEVEEIKNSK HRAFDNLKRS1380
 1381 HLRNTILPLL NIDKAHLYLI SNYNAIAFGS AERLGKKSLE DIKDIVNKAA DGYRNYYDFW1440
 1441 YRLASDNVKQ RLLRDAVIPI WEGYNAPGGW VEKYGRYNTD KVYTPLREFF GPMDKYYNYN1500
 1501 GTGAYAAIYP NSDDIRTDVK YVHLEMVGEY GISVYTHETT HVNDRAIYLG GFGHREGTDA1560
 1561 EAYAQGMLQT PVTGSGFDEF GSLGINMVFK RKNDGNQWYI TDPKTLKTRE DINRYMKGYN1620
 1621 DTLTLLDEIE AESVISQQNK DLNSAWFKKI DREYRDNNKL NQWDKIRNLS QEEKNELNIQ1680
 1681 SVNDLVDQQL MTNRNPGNGI YKPEAISYND QSPYVGVRMM TGIYGGNTSK GAPGAVSFKH1740
 1741 NAFRLWGYYG YENGFLGYAS NKYKQQSKTD GESVLSDEYI IKKISNNTFN TIEEFKKAYF1800
 1801 KEVKDKATKG LTTFEVNGSS VSSYDDLLTL FKEAVKKDAE TLKQEANGNK TVSMNNTVKL1860
 1861 KEAVYKKLLQ QTNSFKTSIF K

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