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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26991883, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAPALLAEG ISHRYGDLIA LHPLGFSLPV GTRCALIGPD GAGKSTLLGL IAGVKRLQQG  60
   61 ELQVLGGSIR QRRHRTALYP KVAFMPQGLG NNLYPELSIS ENIRFFATLF GLGRRECEQR 120
  121 MANLLQATDL QHFAQRPAGK LSGGMKQKLG LCCALIHEPD LLILDEPTTG VDPLSRRRFW 180
  181 ELVEQVRAQR PQLTLLVATA YMEEAEQFEH CLMLDGGRLL AAGPSHELAA VTSSGKLDDA 240
  241 FTHYQGAGKA QHQPLAIPPR QATDGPVAIE AHDLTLRFGD FTAVNKVSFA IGRGEIFGFL 300
  301 GSNGCGKTTT MKVLTGLMPA SEGSASLLGR PVDASDLATR KRVGFMSQSF SLYGELSTRQ 360
  361 NLALHARLFD LPKAESAQRI DELIERFDLA AIADQPSGAL PLGLRQRLSL AVAVLHRPEV 420
  421 LILDEPTSGV DPAARDDFWR LLVELSREQG VTIFLSTHFM NEAQRCDRIS LMHAGRVLAC 480
  481 DTPDALQHQY QGDTLEDAFV RCLEQAQELA PAATDSNVLE QASTPTLPLR RGFSLRRLLA 540
  541 VAVREGKELL RDKVRLAFAL LGAVFMMVIF GYGISLDVEN LAFAVHDQDQ SPQSRAYLEA 600
  601 FRGSRYFAEQ APIRDSSELH QRLQRSEIKL ALEIPPGFGR DLYAGRQPVV AAWLDGGMPF 660
  661 RAETSRNYVE AVHQANLEQL AKASPQPQPR QDPVRLETRF RYNQDVVSVN AIGPGVMALI 720
  721 LAFIPAMLTA LGIVREKELG SITNFYATPL TRLEFLLGKQ MPYLAVSLVN LALLVAMNRW 780
  781 LFAVPLKGSV LALACGGVAY LLATTSLGLL ISAFTRTQIA AILGTMIITS LPTIQFSGLI 840
  841 VPRSSLDGAA AVMGQLFPAG YFLDIAVGTF TKALGLRELW PQCLILLSFF AAFTGLSLAM 900
  901 LKKQEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle