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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24986566, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQPIRLKDH EKDARLVRKR VVVGAVAIML LVCVLIARLY YLQIIQYDYH STLSENNRVH  60
   61 VQPIPPTRGL IFDRNGVIVA DNRPSFSLSM TRERAGNWQE VLDTIVEVLD LTADDRALFE 120
  121 KRMRQGRRPF EPVPILFELN EEQIARVAVN QFRLPGVEVV AQLVRHYPQG AHFAHSVGYV 180
  181 GRINEKELKT LDPVNYSGTH HIGKTGIERF YEAALHGQVG YEEVETNARG RVLRVLKRTD 240
  241 PKPGKDIVLS LDIKLQEAAE AALGGRRGAV VALDPRTGEV LAMVSQPSFD PNLFVTGISF 300
  301 KAYAELRDSI DRPLFNRVLR GLYPPGSTIK PAVAIAGLDS GVVNASSRVF DPGYYQLPNY 360
  361 DHKYRNWNRS GDGWVDLDTA IMRSNDTYFY DLAHKMGIDR LSSYMNKFGI GQRVSLDMFE 420
  421 ESAGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQATPL QLAQATALIA NKGVWNRPHL 480
  481 AKTIEGLPPV DDNPMEDIVL RDKSDWAKVT HGMEQVMHNA RGTARKAAAG AQYRIAGKSG 540
  541 TAQVVAIKQG EKYDRNKLQE RHRDHALFVA FAPAEAPKIV VSVMVENGES GSGVAAPVVR 600
  601 QIMDAWLLDE NGRLKPEFAP ATVTQESAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle