YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24986476, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTMPKRTDI KSILILGAGP IVIGQACEFD YSGAQACKAL REEGFRVILV NSNPATIMTD  60
   61 PAMADATYIE PIKWQSVAKI IEKERPDAVL PTMGGQTALN CALDLERHGV LEKFGVEMIG 120
  121 ANADTIDKAE DRSRFDKAMK DIGLECPRSG IAHSMEEANA VLEKLGFPCI IRPSFTMGGT 180
  181 GGGIAYNREE FEEICTRGLD LSPTKELLID ESLIGWKEYE MEVVRDKKDN CIIVCSIENF 240
  241 DPMGVHTGDS ITVAPAQTLT DKEYQIMRNA SLAVLREIGV ETGGSNVQFG ICPNTGRMVV 300
  301 IEMNPRVSRS SALASKATGF PIAKIAAKLA IGYTLDELQN DITGGRTPAS FEPSIDYVVT 360
  361 KLPRFAFEKF PKADARLTTQ MKSVGEVMAI GRTFQESLQK ALRGLEVGAC GLDPKVDLAS 420
  421 PEAASILKRE LTVPGAERIW YVADAMRSGM TCEEIFNLTG IDMWFLVQME DLIKEEEKVK 480
  481 TLALSAIDKD YMLRLKRKGF SDQRLAVLLG ITDKNLRRHR HKLEVFPVYK RVDTCAAEFA 540
  541 TDTAYLYSTY EEECEANPST RDKIMILGGG PNRIGQGIEF DYCCVHAALA LREDGYETIM 600
  601 VNCNPETVST DYDTSDRLYF EPLTLEDVLE VCRVEKPKGV IVHYGGQTPL KLARALEEAG 660
  661 VPIIGTSPDA IDRAEDRERF QQMVQRLSLL QPPNATVRSE EEAIRAAGSI GYPLVVRPSY 720
  721 VLGGRAMEIV YELDELKRYL REAVQVSNDS PVLLDHFLNC AIEMDVDAVC DGTDVVIGAI 780
  781 MQHIEQAGVH SGDSACSLPP YSLSKEVQDE VRVQVKKMAL ELGVVGLMNV QLALQGDKIY 840
  841 VIEVNPRASR TVPFVSKCIG TSLAMIAARV MAGKTLKELG FTQEIIPNFY SVKEAVFPFA 900
  901 KFPGVDPILG PEMKSTGEVM GVGDSFGEAF AKAQMGASEV LPTGGTAFIS VRDDDKPQVA 960
  961 GVARDLIALG FEVVATAGTA KVIEAAGLKV RRVNKVTEGR PHVVDMIKND EVSLIINTTE1020
 1021 GRQSIADSYS IRRNALQHKI YCTTTIAAGE AICEALKFGP EKTVRRLQDL HAGLKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle