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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24986247, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKHLQVRGR LYYRSLAHGL RLTMRRLLFC FLLVLTSLTA IAAEPARPKV GLVLSGGAAR  60
   61 GLAHIGVLKA LEEQGVRIDA IAGTSMGAVV GGLYASGYSV EELEKLATTL DWQQALSDAP 120
  121 PREDVPFRRK QDDRDFLVKQ KLSFRDDGSL GLPLGVIQGQ NLSLLLESKL AHTADTRDFD 180
  181 KLPIPFRAVA TDIASGEKVV FRRGHLPQVI RASMSIPAVF APVELDGRLL VDGGMVDNIP 240
  241 VDVAREMGVD LAIVVDIGTP LRDRKQLLTV VDVLNQSITL MTRRNSEEQL ASLHRDDILI 300
  301 QPSLTAFGVT DFGRARHMID AGYRATRLLD PRLAALRQLE GDASLAVARS PRQRTPVITA 360
  361 IRIENDSKVS DDVIRSYIRQ PIDAPLELDR LQTDMGTLYG LDYFDRVQYR VVHKGNDHTL 420
  421 VINARGRRGG TDYLRLGLNL SDDLRGDSAF NLGASYRVNG INSLGAEWLT RGQIGDQQAL 480
  481 YSEFYQPLDV GSRYFIAPYL DLGSQNIEAT LDNDPVAEYR LERYGFGLNV GRQIGNSGEV 540
  541 RLGVGKAWGE AEVRIGDQDL PKVSFNEGFY ELKYSFDTLD NVYFPHHGED IGLTLRKYDK 600
  601 SLDSDQDYRQ WLFTLDKAIS SGPNTFVLGG SYGRTLDDTE VVTSSFVMGG ARQLSGFRED 660
  661 SVSGQNASLL RMVYYRRLTP RAYVPLDFPL YIGGSLERGR AWNNDNEFDS GYINAASIFL 720
  721 GLDTPLGPLN FSYGANSAHE QAVYLNLGHT F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle