YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26991058, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAVVENAP AKAGSPAAKP PLFGMAFLEN ISQMPMLRQI GLLVGLAASV AIGFAVVLWS  60
   61 QQPDYRPLYG SLSGMDTKQV MDTLAAADIP YNVEPNSGAL LVKADDLSRA RLKLAAAGVA 120
  121 PSDGNVGFEL LDKEQGLGTS QFMEATRYRR SLEGELARTV SSLNNVKAAR VHLAIPKSSV 180
  181 FVRDERKPSA SVLVELYPGR ALEAGQVMAI VNLVATSVPE LDKSQVTVVD QKGNLLSEQI 240
  241 QDSALTQAGK QFDYSRRVES MLTQRVHNIL QPVLGNDRYK AEVSADLDFS AVESTSEQFN 300
  301 PDQPALRSEQ SVDEQRASSQ GPQGVPGALS NQPPGAASAP QTTGGAATPA AAIQPGQPLV 360
  361 DANGQQIMDP ATGQPMLAPY PSDKRQQSTK NFELDRSISH TRQQQGRMAR LSVAVVVDDQ 420
  421 VKIDPATGDT TRAPWGAEDL ARFTRLVQDA VGFDASRGDS VTVINVPFAA DRGEEIADIA 480
  481 FYQQPWFWDI VKQVLGVVFI LVLVFGVLRP VLNNITGGGK QAAPDSDMEL GGMMGLDGEL 540
  541 ANDRVSLGGP TSILLPSPSE GYEAQLNAIK GLVAEDPGRV AQVVKDWINA DE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle