YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24985125, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLLSTLLI LTALGLQGCG LREPMPAEQD SETPTLTPRA STYYDLINMP RPKGRLMAVV  60
   61 YGFRDQTGQY KPTPASSFST SVTQGAASML MDALSASGWF VVLEREGLQN LLTERKIIRA 120
  121 SQKKPDVAEN IMGELPPLQA ANLMLEGGII AYDTNVRSGG EGARYLGIDI SREYRVDQVT 180
  181 VNLRAVDVRT GQVLANVMTS KTIYSVGRSA GVFKFIEFKK LLEAEVGYTT NEPAQLCVLS 240
  241 AIEAAVGHLL AQGIERRLWQ VAGDPADGKA TVDKFLSQNQ QP

Type	Start	End	Confidence
Signal Peptide	1	20	0.94
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	282	0.99