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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24985059, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLLASVLL AIGLANSTEL QASSEPRHLL ARSISAAAPL TLSGDDRHWL KQRERLVMGS  60
   61 ARPDYPPFEI NVSQHDYEGL SADYAGIIGE QLDIPIEVRR FDSRHEAITA LRDGRIDLLG 120
  121 SSNAFEAADA QLSLSTPYAD DLPVIVTREG RSLKSTPELA GLRLAMVDHY LPAVSVRTLY 180
  181 PKAQLSLYRS TLAGLAAVAL GEADAYLGDA ISTDYMIGKS FQGTLKIDHF SQLAPEAFAF 240
  241 AIASDNPRLH RLVDKALSRI SESERLNILR RWSSGNTSLL LQRHLTALSE EEESWITAHP 300
  301 TISVLVNTSL APLTFNDAQH RPSGITLDLL KQISLRTGLQ FTPVESASSQ AMIDRLVRGE 360
  361 AQMIGALGYG ADRLKQLRYT RPYLVSPRVL VTRNDGESPA QAKALDGKRI ALVRGSPQQA 420
  421 VLQQRYPQAE IVEVDNPLGQ MEAVANGVAD AALSSHINAA YYISHVFKDR LRIANMLDDA 480
  481 PAIAAFAVAA DQPQLQAILD KALLSIPPEE LDQLINRWRT STLVSDSPWR DYRTLALQVL 540
  541 VLSALLLAGV VFWNSYLRKL INQRTEAQHA LQAQLALSRG LLEQLRQAKD DAEQASQTKS 600
  601 TFLATMSHEI RTPMNAVIGL LELALEDSRS GRSDAQTLQT AHDSAIGLLE LIGDILDISR 660
  661 IESGHISLQP VPTNLVELVR ATLRVFEGNA RAKGLHLHGE LPAEPVWVLA DPLRLKQILS 720
  721 NLISNAIKFT DRGEVQACLL LPKVAGHGIL AIELNVRDTG IGISPADQAR LFSAFVQVDG 780
  781 PRARQGAGLG LVISRTLAEL MGGALSLQSV EGVGTRVQVS LRLPVCEAPA QADPQLTTHE 840
  841 SNSGPLNILV VDDYPANLLL LERQLQTLGH HVTLAENGEI ALARWQEARF DLVITDCSMP 900
  901 VMDGHELTRR IRSLEGERGL PAGRILGVTA NAQAEERTRC LASGMDECLF KPIGLRTLKT 960
  961 HLPQVRPQQP SPEPFHSGFD LAELRHLTQD DEQLTRHLLE QLSISVGEDL AALRALSTDA1020
 1021 PDETVRALAH RIKGGAKMIR VRTVVKDCEA IEHAHAKGLP TVEQRAQLQV SLQALLDEMR1080
 1081 EALNAIAASR LSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle