YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26988514, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKGIILAG GSGTRLHPAT LSVSKQLLPV YDKPMIYYPL STLLLAGIRD ILIISTPQDT  60
   61 PRFEQLLGDG SQWGLNLSYA IQPSPDGLAQ AFTIGADFIG NDPSALVLGD NIFYGHDFQA 120
  121 LLLNADKRES GASVFAYHVH DPERYGVAEF DDSGRVLSLE EKPAVPKSSY AVTGLYFYDN 180
  181 QVVNLARELK PSPRGELEIT DLNNLYLQQQ QLQVEIMGRG YAWLDTGTHD SLLEASQYIA 240
  241 TMERRQGLKV ACPEEICYRA GWINAEQLEC LAQPLLKNGY GKYLQNLLKE KVF

Type	Start	End	Confidence
Signal Peptide	1	18	0.59
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	293	0.98