YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148546491, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANVVDHTS MWSLVSNASV VVQLVMLTLV AASVTSWIMI FQRSTMLRAG RRALDAFEER  60
   61 FWSGIDLSKL YRQAGSNPDP DSGVEQVFRA GFKEFSRLRQ QPGVDPDAVM EGVGRAMRVA 120
  121 ISREEEKLEQ SLPFLATVGS TSPYIGLFGT VWGIMNSFRG LASAQQATLA TVAPGIAEAL 180
  181 IATAIGLFAA IPAVIAYNRF AARSEVLIGR YYTFADEFQA ILHRKVHTSE E

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.94
Transmembrane Helix	20	41	0.96
Cytoplasmic	42	131	0.99
Transmembrane Helix	132	154	0.89
Non-Cytoplasmic	155	175	0.85
Transmembrane Helix	176	197	0.89
Cytoplasmic	198	231	0.94