YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26987671, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAASRRNNG WVIWLTFAIG LLLSVSPMPQ FMEVFRPMWL ALLVSFWTLA VPNKVGMTTA  60
   61 FVLGLAEDVL YGTLLGQNAL VLTLITFLVL SLQQRLRMFP MWQQSLVILV IFGIAQLIQL 120
  121 WLSALTGNRL PTLALVWSAV ISALLWPWIS FALRDLRRRL HIN

Type	Start	End	Confidence
Cytoplasmic	1	9	0.73
Transmembrane Helix	10	31	0.91
Non-Cytoplasmic	32	69	0.73
Transmembrane Helix	70	92	0.87
Cytoplasmic	93	101	0.84
Transmembrane Helix	102	123	0.88
Non-Cytoplasmic	124	132	0.71
Transmembrane Helix	133	152	0.94
Cytoplasmic	153	163	0.91