YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46309121
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IRARTRGSSR VDLQRVTEVI QRAIDSCNAD AVVLVNQPGI TLDDLEDYQS FIVLRSYSFM  60
   61 SSTLGAIPRV TRPVNLDGLS SYALRKCGGK YIEANGLDEI DTYIDSHKRV IRINLPELPD 120
  121 EPEARREALE LADLSLRKTL RKLPSPYHLV VYTSSTMGLL NVNDETRWAT KTIFPDLSED 180
  181 ASRSVEFERN EHVMEVDRPF PSKRTKLLNL TAFQCSHLLD HEVIYENEML ILGILAVTFV 240
  241 FLLLQLLKLI LIAYRWSLGR PYITTAHVKP HIKATKAE

Type	Start	End	Confidence
Non-Cytoplasmic	1	228	0.69
Transmembrane Helix	229	252	0.87
Cytoplasmic	253	278	0.76