YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12657467
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMLKSSLAF LVLALAFFLC FIMSTGDGSY DYFQFVQQWP PTNCRVRIKR PCSNPRPLQY  60
   61 FTIHGLWPSN YSNPTKPSNC NGSQFDGRKV SPQLRAKLKR SWPDVESGND TRFWEGEWNK 120
  121 HGRCSEQTLN QMQYFERSQN MWRSYNITEI LRNASIVPHP TQTWTYSDIV SPIKKATKRT 180
  181 PLLRCKQDKK TQLLHEVVFC YEYNALKQID CNRTAGCQNQ PAISFQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	226	0.99