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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RENR_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLVVLLSS LVSSALANEF SILRSPGSVV FRNGNWPIPG DRIPDVAALS MGFSVKEDLS  60
   61 WPGLAVGNLF HRPRATIMVT VKGVDKLALP TGSVISYPLE NAVPFSLDSV ANSIHSLFSE 120
  121 ETPVVLQLAP SEERVYMVGK ANSVFEDLSV TLRQLRNRLF QENSVLNSLP LNSLSRNNEV 180
  181 DLLFLSELQV LHDISSLLSR HKHLAKDHSP DLYSLELAGL DELGKRYGED SEQFRDASRI 240
  241 LVDALQKFAD DMYSLYGGNA VVELVTVKSF DTSLVRKSRT ILETKQENTQ SPYNLAYKYN 300
  301 LEYSVVFNLV LWIMTGLALA VIITSYNIWN MDPGYDSIIY RMTNQKIRMD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle