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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27358953, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLSLYIAL ALTSGAVLAE PIPSKPATQA TIEANQAVYQ ALNFKDETDF KNAQRGLIAK  60
   61 QDVVIIKNAN GDVVWDLEAY KQFISLENKA PDSVNPSLWR NAQLNMINGL FEVTEGIYQV 120
  121 RAYDLSNITF IKGDKGWIVF DPLISQETAK AALEFVNAQL GERPVTAVIY SHSHIDHFGG 180
  181 VRGIVNEEDV KAGKVEIIAS HGFTEHAVSE NVIAGNAMGR RAIYMYGALL PRNERGGVNG 240
  241 GLGQTTSTGL PTLIVPTRII EKTGEELTVD GVRMVFQYTP GTEAPTEINT WFPDKKALWM 300
  301 AENSTNTMHN ILTLRGAQVR DALKWSSYLN ETIEMWGDEV EVKFQSHHWP MWGSKEIVAY 360
  361 FKGQRDMYKY THDQTVRLMN QGYIGSEISE VIQFPEELEK NWSTRGYYGT LRHNSRAVYQ 420
  421 RYMGWYSGNP SDLNNLPPTN AAVKYVEYMG GESATIDKAQ ADFDKGNYRW VAEVLKHVVF 480
  481 ANPQSKRGKA LLADTYEQLG YQAESGPWRS VYLQGAYELR NGTPKAGGTN TASPDIIKNM 540
  541 PPEMLFDYLA VRILPEKAAG KTFAININFT DLDEQYTLYV ENSVLNHTRK QAKKADVTLN 600
  601 LTKATLDDVQ LGNITLEKAI ADGDVQLKGN TQVFKDFVGM LDKFDFWFNI VTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle