YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27358944, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFLAMGIC SIAMLSVTQK VAELRTQSRD YQQDLYRFYR LSQELKQSSD HLTKFARAYV  60
   61 VTGDDYWEAL FNKVLDIRDG KLPLPAGNEY EYWDLAASSA EYVPPFTSET GVPLLQRLRD 120
  121 SGISATEFLE LKSALMLSDN LVNLEREAFL AVKGFKLEPD GKEFYTGKPD LPYAQSLLYG 180
  181 KVYFEEKAKI MKAIGSAHQA IVHRIEGNIE QTDTQELQYQ YVYRVLVAIL LASIVVSFTL 240
  241 LWRLYISPLS KLLRTVVNQV KAQDYAFTIT QTAYAELQKF IDSLNVVFHH ISEQLSQNTL 300
  301 VKDFNIVLRT SQSTQSLCHE VTQFLLHQFP VQQVSIAIYR DDKLIRIAGA GYDDTISREI 360
  361 SDQSSTQLSV LLSDKPYSMK SLQGKYTTHV NGGVLELNEI YYFPLCVNKQ PVALLELGTV 420
  421 DTLTPLQYQW LSQMLDDLSV SIQLSQNVEL QRKAEQKVLE QSQLNQEILN ATPNPMYCLS 480
  481 AQGKYLTVNA KFSELTGLAM HEIVGRTPIE VFSQQDASHH FTQVHQELSQ EQCSKNYELS 540
  541 LLDSQGGCRD MLVCEASFNN SQGRVSGIVG ILLDLTERKQ MESELRDAKD TADAMSRAKG 600
  601 DFLANMSHEI RTPMNAILGM AHLALNTELD PSQRKYLTRI NESAKNLLGI INDILDFSKI 660
  661 EAGKLSVESI DFSLDEVFEN LTNVISFKAQ EKGIEFLLDI DPRVPVGLVG DPLRLGQVLV 720
  721 NLCGNAVKFT EKGEILVSVM PESQSSDDVT LRFSVKDTGI GIDKEKIADL FNAFSQADTS 780
  781 ITREFGGTGL GLSISKQLVE LMGGQLSVSS AVGMGSTFTF TIHCGLQEAK MRDIAKPISG 840
  841 LAGKRALIVD DNDSARNILM TLLSAMQFDA KAVSNGFEAL DELRQGAFDM VFVDWNMPGM 900
  901 NGLELLQTAH QERLLAETKN FLVTAYGREI SMDENSSKLV DSLIVKPVNP SNLLDAIMDS 960
  961 YGIEHVTRSS TTVTFEKPVF DGQTLLLVED NEVNQEVAIG LLNGTNLNII TADNGKLAIE1020
 1021 ALEHHPIDLV LMDMQMPVMD GITATKAIRE RAEWATLPIV AMTANAMQSD VERCHEAGMN1080
 1081 DHVAKPINVH NLYQVLSQYL SASNAASHTS SSHSTSSSQS TPDRTASADE DDLPTLSGIN1140
 1141 LKEAIFNTGG NKESYLSILS RFLEMQLEEL PMFKEVVEKE DWDMAARMAH TLKGAAANLG1200
 1201 VTPLAQLAIK MEKSIDHRSK TVIGELELAG VALDKLHAQL SEWQKRHVNV SEQECEEAAE1260
 1261 LYKRLVELVE QYDVAAVDVI KQAKDCDVWT DEQKQQLINA IESFEFEQAK EMLAAFPKPE1320
 1321 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle