YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27366302, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCSRRNFLA GGGALIMTTG IAGTSMVTGR LAFAEEDKGQ AIRYGMIHDE TACIGCTACT  60
   61 DACREVNKVP EGVSRLEIIR SEPHGEYPNV DYRFTRKSCQ HCENPPCVYV CPTGAAYKDE 120
  121 KTGIVDVHKE KCVGCGYCLA ACPYQVRFFN PVDHSADKCN FCRDTNLAQG KLPACVESCP 180
  181 TKALIFGDLN DPQSDVNRVL AEKVYYRDKV HLGTKPKLFK IPHQKGEV

Type	Start	End	Confidence
Signal Peptide	1	23	0.82
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	228	0.96