YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27362190, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAFIRILLA AIFVVVTTLS ALIYCLFSPR DPKHVHVFCR WFNQLHKIVG MTLIQRGAEH  60
   61 ARQDGHAVYV SNHQSVFDFV TSPGMLPPRT VTIGKKSLLW VPFFGQLYWI TGNILIDREN 120
  121 KSKARDTIAQ VAEAIQTRDL SVWVYPEGTR SKGRGLLPFK TGAFRMAIEA GVPIIPMCVS 180
  181 TTHNKIALNR WKNGVVITEM LPPIDTKGYT LQQARQLADH CHQIMETKIR ELDEEVAKLE 240
  241 AEQRSPRNQA NA

Type	Start	End	Confidence
Signal Peptide	1	21	0.89
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	252	0.95