YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27361645, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTADISILDL FLQASLLVKL VMLTLLGMSV VSWAMIIKRS KVLSKAAKDA EEFEDKFWSG  60
   61 IDLSQLYQQI KARKDELSGT EEIFYAGFTE FARLRKTNPT SPDFVMEGTG RAMRVAVSRE 120
  121 VDELETSLPF LATVGSITPY IGLFGTVWGI MHAFIALGEV KQATLSMVAP GIAEALIATA 180
  181 MGLFAAIPAV MAYNRFASKV GKLEHNYSTF SEEFHSILHR QAMAGSQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.90
Transmembrane Helix	16	37	0.93
Cytoplasmic	38	133	0.95
Transmembrane Helix	134	156	0.82
Non-Cytoplasmic	157	171	0.82
Transmembrane Helix	172	193	0.89
Cytoplasmic	194	227	0.95