YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CCME_VIBVY
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPRRQKRLG IILAILIGVS ATIGLMIYAL NQNMDLFYTP TELVNGKDDG TKPEVGQRLR  60
   61 IGGMVVMGSV RRDPESLKVR FDLADVGPKV TIEYEGILPD LFREGQGIVA QGVLKDATTV 120
  121 EAFEVLAKHD EEYMPPEIAE AMKKTHAPLQ YSEEQKQGSG Q

Type	Start	End	Confidence
Cytoplasmic	1	8	0.79
Transmembrane Helix	9	30	0.77
Non-Cytoplasmic	31	161	0.99