YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27365289, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMRPSRYRH RLFGLTGALV AMTSAPRVWA APQAPELDLA TTFASLLLVI AFILFLAWLM  60
   61 KRIQTPAFGQ KHGLKVVSQI AVGTRERIAV VQAGEEQFLV GITSQSIQLI AKLEHPLKQE 120
  121 ELAKTAFAQQ FSQLLKKNEQ

Type	Start	End	Confidence
Cytoplasmic	1	11	0.87
Transmembrane Helix	12	31	0.92
Non-Cytoplasmic	32	38	0.91
Transmembrane Helix	39	59	0.94
Cytoplasmic	60	140	0.97