YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27361079, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTFSLILV IVTLITGVVW LLEKLVWAKK RQQKVAEIES QTVNGLDAQT LAKAKMQPWW  60
   61 VENSVSIFPV IAFVLVLRSF IYEPFQIPSG SMMPTLLVGD FILVEKYAYG LKDPVWRTQL 120
  121 VETGKPERGD IVVFKYPPSP NIDYIKRVVG LPGDTVRYNR QKEICIQPKG ESVCHMAIRN 180
  181 NVVESEFIQD GINLTQTDEQ LGEVKHQILV NPLRQDRVEA YAPRAGVSEW VVPQGQYFVM 240
  241 GDNRDNSADS RYWGFVPEAN LVGKAVAIWI SFEFDRGSDS VLPSWIPTGV RFNRIGGIH

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.83
Transmembrane Helix	5	27	0.75
Cytoplasmic	28	58	0.86
Transmembrane Helix	59	82	0.75
Non-Cytoplasmic	83	299	0.83