YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27360980, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPIFGRGPS LQLRLFFAGI TSASLMLADG RLDAFSGVRY FLNSLVAPIQ YTANLPRSMF  60
   61 DGVYERFSTR QSLLEGNQNL KREVLRLRSD LLLLEQYKEE NQRLRKLLGS SFVRDEKKMV 120
  121 AEVMAVDTSP YRHQVVIDKG RIDGVYIGQP VINEKGIVGQ ITFVAAHNSR VLLLSDAKNA 180
  181 IPVQVVRNDI RVIASGNGDI DEIQLEHIPT STDIQVDDLL VTSGLGGVYP EGYPVAYVTS 240
  241 VEHDTRREFA AIKAKPVVEF DRLRYLLLVW PNEDRQHKVL NANVDEHATQ EVSDGE

Type	Start	End	Confidence
Signal Peptide	1	30	0.86
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	296	0.99