YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27364830, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQQGMTLI ESIVAMVLIA VAMVTLTSLL FPNVKNSAAP HYQTRAIALG QGFMSQILAR  60
   61 GFDHNSNFDG GSTRCGEDGV LCTTADGLGA EEAQVVDYND VDDYIGCWYT TNTQSQCPTG 120
  121 SVQKSLADVF GSTINTEYPN FRVDVRVFYD GNMDGSDDGA VSTLKRIEMA IHAGQYGPYP 180
  181 LVAYKGNY

Type	Start	End	Confidence
Cytoplasmic	1	8	0.70
Transmembrane Helix	9	31	0.75
Non-Cytoplasmic	32	188	0.82