YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27364730, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVLKVSLL AATVMLAVGC QKEEAKPAAA PQAEQVQAET GKAVHFKSED DKAAYAIGVS  60
   61 FANYLSASLD KPSEIGINLN KDLVLKGIEH VFAGNPELNE EETRAALEAL DKRVAETMQK 120
  121 KAAEKAEAAK KAGDEFRAEF EKQEGVVKTD TGLLYQVITP AEGEKPKDTD TVQVHYKGTL 180
  181 TDGTQFDSSY DRGEPATFPL NRVIPGWTEG VQLMPVGSKF KFVIPPELAY GAQDTPSIPA 240
  241 NSTLVFEVEL LKIENGDNAQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	260	0.99