YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27360593, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLKKTLAS FGIGSAKVDS ILQQEVLYPG QAANIKVHVY GGSSEQEIDN IHLKLCCRYI  60
   61 AEVKEDRGSS SQGQQTRRVP QSHVLASWSL PYAFVIKPSE ERVFDVALDI PFNTPITIGD 120
  121 AKVWLETGLD IALAIDPTDK DILTVRPDPM MDGIFTALEE QGLRIRQVEC EEVKGFELPF 180
  181 VQEFEFVPTT GPFHGRWREL EVVAYRSPNE LKLWFEIDRH REGGRGMLAS LLGLGKLQRE 240
  241 LVLPLNLSAK QVGETVLGYL EETT

Type	Start	End	Confidence
Signal Peptide	1	20	0.58
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	264	0.99