YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29830075, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGRREMAVK DRDRFSTATR LRLLGEQTAA RVYRSQTKRQ ARRSRLTSRA ALLALVLCSL  60
   61 IVALAYPIRQ YVSQRAEVAD LQRQQERARQ RVEQLRDLKA RWQDDAYAEQ QIRQRLHYVM 120
  121 PGETGYIVID PAAAKPARTT QGAADRPWYA NVWDGVDKSD ASDQ

Type	Start	End	Confidence
Cytoplasmic	1	45	0.65
Transmembrane Helix	46	66	0.61
Non-Cytoplasmic	67	164	0.99