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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27359839, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKQTLIAAS VIASLAGCST LQSDEQRVVN SLADNLDIQY QVMTNHGANE GLACGDMGAE  60
   61 WASCNRVNMT LVNQGDAVNA KDWAIYFHSI RLILDVENDQ FKISRVTGDL HKLEPTDKFD 120
  121 GFAAGEEVVL PLIGEYWTLF ETDFMPGAFV TAPNAEPKMI ASLNTEDVAS FVAGLEGNNL 180
  181 KRTPDDNNVF ASAVSRFEKN EDLAKQDVST TLLPTPLFVE AGKGTVDIAA GIALPKDAFD 240
  241 AAQFAAIQER AEVVGVNVRG DVPVSITVVP ADFTGELAKS GAYEMSIQGG GIAIKAFDQA 300
  301 GAFYAVQSIF GLIDSQNADS LPQLSIKDAP RFDYRGVMVD VARNFHSKDA ILATLDQMAA 360
  361 YKMNKLHLHL TDDEGWRLEI PGLPELTEVG ANRCFDIEEK SCLLPQLGSG STSDNFGSGY 420
  421 FSKADYVEIL KYAKARNIEV IPEIDMPAHA RAAVVSMEAR YDRLMAEGKE AQANEFRLMD 480
  481 PQDTSNVTTV QFYDKQSFIN PCMESSTRFV DKVISEVAAM HLEAGAPLTT WHFGGDEAKN 540
  541 IKLGAGFQDV NAQDKVSWKG TIDLSKQDKP FAQSPQCQTL ITDGTVSDFG HLPSHFAEQV 600
  601 SKIVAEKGIS NFQAWQDGLK YSEGENAFAT ENTRVNFWDV LYWGGTSSVY EWSKKGYDVI 660
  661 VSNPDYVYMD MPYEVDPKER GYYWATRATD TRKMFGFAPE NMPQNAETSL DRDGNGFTGK 720
  721 GEIEAKPFYG LSAQLWSETV RNDEQYEYMV FPRVLAAAER AWHRADWEND YKVGVEYSQN 780
  781 SNLVDKAALN LDYNRFANVL GQRELAKLEK SGIDYRLPVP GAKVEGGKLA MNVQFPGVTL 840
  841 QYSLDGKNWL TYADDARPTV EGEVFIRSVS ATGEKASRVT SVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle