YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27359827, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.50
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYSNTYLSS FTIYKCRAFY KSYAKSIGIL LTLFSFFAHG ATENQIKQIQ LAAEEHILAN  60
   61 VEAPLGGQLT VSAANIDSRI KATDCPIALV TSSTSTNSTR SNINVLVECP PDEWQIYVPV 120
  121 RLSIAVSLVT ANRSLSRGEI ISFSDVSTNL IELQRFRKEG YSDINQVVGA KVKRVLRPGD 180
  181 VVERGDICVV CRNEKVVIKA TKDGMTITTQ GTSLQDGATG EQVRVKNDKS QRIIEGIVTG 240
  241 IAEVTVSF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.49
Transmembrane Helix	21	41	0.47
Non-Cytoplasmic	42	248	0.99