YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27359634, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESIMEQSL LAKIGHFTDR VEEGLIAFFL GAMTLLTFVN VVMRYLFNDN ILWALELTVF  60
   61 MFAWMVLVGA SYGVKKHFHI GVDVVIDKAP PPLRKVLALV AVSCCLTFSI LLLIGSWNYW 120
  121 YPFATERAWY ETDDIPMPEI FQFMSDWFNE GEAYEKIPRF IPYMALPVGM ALLTFRFLQV 180
  181 AWRILNNQQD RMIAGHEAEE DLEALKAEMG DADDLMGGSR RDGKEQ

Type	Start	End	Confidence
Cytoplasmic	1	23	0.92
Transmembrane Helix	24	43	0.93
Non-Cytoplasmic	44	51	0.74
Transmembrane Helix	52	74	0.91
Cytoplasmic	75	95	0.91
Transmembrane Helix	96	115	0.96
Non-Cytoplasmic	116	159	0.92
Transmembrane Helix	160	180	0.87
Cytoplasmic	181	226	0.94