YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55276718
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYAMVARGT VVVAEHTAYT GNFRDIAGQC LHKLPAGDSR FAYNCDGHTF TFLLHQGYAY  60
   61 CVVATESAGR EVPLAFLERI KEDFNRRYAG GKAATATANS LTKDFGPRLK EQMKYCMDHP 120
  121 EEVSRLSKVQ AQVSEVKGIM MENIDKVIDR GEQIDGLVTR TEQLHDHALD FRTEGTRIRR 180
  181 RMWYQNMKIK LIVVGIVVAL ILIIVLSICH KKDCN

Type	Start	End	Confidence
Cytoplasmic	1	188	0.94
Transmembrane Helix	189	209	0.95
Non-Cytoplasmic	210	215	0.87