YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50844677
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSGKVFTL AEVSEHNNPK DCWLVIEGKV YDVTKFLEDH PGGDEVLLSA TGKDATDDFE  60
   61 DVGHSSSARA MMDEFYVGEI DSSTIPSRMA YTPPKQPHYN QDKTMEFIIK FLQFVVPLLI 120
  121 LGLAVGIRFY TKSAEA

Type	Start	End	Confidence
Cytoplasmic	1	108	0.75
Transmembrane Helix	109	130	0.84
Non-Cytoplasmic	131	136	0.75