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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56606002, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCASGKYGSR GPALIPRMKT KHRIYYITLF SVVLLGLIAT GMFQFWPHSI ESSAEWSLDR  60
   61 RSVHDAPLVR ISVNSPIPGR GDLSCRMHTC FDVYRCGYNP KNKIKVYIYP LQRFVDEVGV 120
  121 PISSTGLSRE YNDLLSAISD SDFYTDDVSR ACLFVPSIDV LNQNSLRIRE TAQALAMLPR 180
  181 WDKGMNHLLF NMLPGGPPDY NTALDVPRDR ALLAGGGFST WTYRQGYDVS IPVYSPLSAE 240
  241 VDLPERQPGP RRYFILSSQT AIHREYRVEL ERLKDENGEA LLLLDKCSNL SQGLTSVRKR 300
  301 CYKGQVYDYP QILQESSFCV VLRGARLGQA TLSDVLQAGC VPVIMADSYI LPFSEVLDWK 360
  361 RASVVIPEEK LPEMYTILKS IPHRQVEEMQ RQARWFWEAY FSSMKAIGMT TLQIINDRIY 420
  421 PYAAHTYEEW NNPPVVKWSS VNSPLFLPLI PPRSPGFTAV VLTYDRIESL FRVITEISKV 480
  481 PSLAKLLVVW NNQNKSPPEE SLWPKVAVPL KVVRTKENKL SNRFFPFDEI ETEAVLAIDD 540
  541 DIIMLTSDEL QFGYEVWREF PDRLVGYPGR LHLWDHEMGK WKYESEWTNE VSMVLTGAAF 600
  601 YHKYFNYLYT YKMPGDIKNW VDAHMNCEDI AMNFLVANIT GKAPIKVTPR KKFKCPECTA 660
  661 IDGLSLDQTH MVERSECINK FASVFGTMPL KVVEHRADPV LYKDDFPEKL KSFPNIGSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle