YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90265381, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQKSEPQ NGRGALFAGG LAAILASACC LGPLVLIALG FSGAWIGNLT VLEPYRPIFI  60
   61 GAALVALFFA WRRIYRPAQA CKPGEVCAIP QVRATYKLIF WIVAALVLVS LGFPYVMPFF 120
  121 Y

Type	Start	End	Confidence
Cytoplasmic	1	15	0.94
Transmembrane Helix	16	41	0.88
Non-Cytoplasmic	42	54	0.82
Transmembrane Helix	55	75	0.90
Cytoplasmic	76	95	0.96
Transmembrane Helix	96	117	0.92
Non-Cytoplasmic	118	121	0.84